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. 2015 Jul 8;112(29):9004–9009. doi: 10.1073/pnas.1509854112

Table S1.

Bond distances between side chain atoms and sugar atoms (NPG and TDG) in two different binding sites in the asymmetric unit (calculated in COOT)

Protein side-chain atom NPG atom Distance in chain A (Å) Distance in chain B (Å) TDG atom Distance in chain A (Å) Distance in chain B (Å)
E269 OE1 O4 2.9 3.2 O4 2.7 (3.6)
E269 OE2 O4 3.2 (3.8) O4 3.4 (4.3)
E269 OE2 O3 2.8 2.8 O3 3.1 (4.3)
R144 NH1 O6 3.0 2.8 O6 2.5 2.6
R144 NH2 O6 (3.7) 3.0 O6 (4.1) 3.5
R144 NH2 E126 OE2 3.2 3.5 E126 OE2 2.8 2.8
R144 NH2 O5 (3.6) 3.0 O5 (4.1) 3.2
R144 NE E126 OE2 (3.6) 3.0 E126 OE2 (3.9) 2.6
H322 NE2 O2 3.4 (3.7) O2 (4.2) (4.1)
H322 NE2 O3 3.1 (3.9) O3 (3.5) 3.2
H322 ND1 E325 OE2 3.2 (3.7) E325 OE2 3.3 3.5
H322 ND1 Y236O 3.3 3.0 Y236O 3.1 2.8
N272 ND2 O4 3.3 2.9 O4 3.1 3.2
F27 CE2 C11 (4.0) (3.6) C6′ (3.8) (3.7)
M23 SD C10 3.5 (4.3) C5′ (4.5) (5.4)
C148 SG O4 (3.9) 3.1 O4 (4.6) (5.2)
C148 SG O6 3.1 3.2 O6 (4.1) (4.3)

Bold numbers indicate distances that are longer than hydrogen bonding.