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. Author manuscript; available in PMC: 2016 Feb 2.
Published in final edited form as: Medchemcomm. 2015 Feb 2;6:555–563. doi: 10.1039/C4MD00571F

Table 1.

Comparison of the features of C2 modifications 3a-f (Chart 1A, Ar = C6H5). A check mark indicates favorable (planarity and rigidity, with respect to the binding cleft in the C2-extended adenine region of the A3AR as in Figure 1) or unfavorable criteria (reactivity) as applied to each linker. All of the maximum lengths shown are within the range of the proposed outward displacement of TM2 in the hybrid A3AR model.

Linker Linker Features
Planaritya Rigidityb Max Lengthc Potential Reactivityd
a C≡C 8.00
b CH2 6.37
c (CH2)2 5.84
d cyclopropyl 7.61
e CH=CH 7.70
f triazole 8.80
a

Ability to fit in a narrow space. This refers to the planarity of the linker only not of the overall C2 substituent.

b

Inability to bend.

c

Distance measured between the C2 of the adenine core and the most distal hydrogen of the phenyl ring.

d

Potential toxicity and/or reactivity with nucleophiles in vivo.