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. 2015 Jul 18;10:37. doi: 10.1186/s40793-015-0027-8

Table 3.

Project information

MIGS ID Property Term
strain ACC19a strain CM2 strain CM5 strain OBRC8 strain AS15
MIGS-31 Finishing quality High-Quality Draft Genome Sequence
MIGS-28 Libraries used Two 454 pyrosequencing libraries, one standard 0.6 kb fragment library and one 2.5 kb jump library Two Illumina libraries, one standard 180 bp fragment library and one 3-5 kb jump library Two 454 pyrosequencing libraries, one standard 0.6 kb fragment library and one 2.5 kb jump library Standard Illumina paired-end library Standard Illumina paired-end library
MIGS-29 Sequencing platforms 454 FLX Titanium Illumina HiSeq 2000 454 FLX Titanium Illumina HiSeq 2000 Illumina HiSeq 2000
MIGS-31.2 Fold coverage 40× 282× 39× 32× 31×
MIGS-30 Assemblers Newbler v.2.3 ALLPATHS v. R39099 Newbler v.2.3 Celera Assembler v.6.1 Celera Assembler v.6.1
MIGS-32 Gene calling method PRODIGAL PRODIGAL PRODIGAL GLIMMER GLIMMER
Locus Tag HMPREF9629 HMPREF9630 HMPREF9628 HMPREF1143 HMPREF1142
GenBank ID AFZE00000000 AFZF00000000 AFZG00000000 ALNK00000000 ALJM00000000
GenBank Date of Release Dec 19, 2011 Dec 14, 2011 Dec 19, 2011 Aug 27, 2012 Aug 13, 2012
GOLD ID Gi06852 Gi06853 Gi06851 Gi09663 Gi09662
BIOPROJECT 49887 49889 49891 78565 78563
MIGS 13 Source Material Identifier HM-483; DSM 28705; ATCC BAA-2665 HM-484; DSM 28703; ATCC BAA-2664 HM-485; DSM 28704 HM-765; DSM 28706 HM-766; DSM 28702; ATCC BAA-2661
Project relevance Human Microbiome Project