Table 1.
MIGS ID | Property | Term | Evidence code a |
---|---|---|---|
Classification | Domain Bacteria | [26] | |
Phylum Firmicutes | [27-29] | ||
Class Clostridia | [30,31] | ||
Order Clostridiales | [32,33] | ||
Family Clostridiaceae | [32,34] | ||
Genus Clostridium | [32,35,36] | ||
Species Clostridium sporogenes | [8,32,37,38] | ||
Type strain DSM 795 T | [8] | ||
Gram stain | positive | IDA | |
Cell shape | rod-shaped | IDA | |
Motility | motile | [39] | |
Sporulation | sporulating | IDA | |
Temperature range | mesophilic, 25–45°C | [39] | |
Optimum temperature | 30-40°C | IDA, [39] | |
pH range; Optimum | 5.7-8.5; 7 | [39], IDA | |
Carbon source | amino acids | [40-43] | |
MIGS-6 | Habitat | human and animal gut, soil, marine and fresh water sediments | [4-7,44,45] |
MIGS-6.3 | Salinity | growth in 2YT medium | IDA |
MIGS-22 | Oxygen requirement | anaerobic | IDA |
MIGS-15 | Biotic relationship | free living | IDA |
MIGS-14 | Pathogenicity | low | [39] |
MIGS-4 | Geographic location | Not reported | |
MIGS-5 | Sample collection | Not reported | |
MIGS-4.1 | Latitude | Not reported | |
MIGS-4.2 | Longitude | Not reproted | |
MIGS-4.4 | Altitude | Not reproted |
aEvidence codes - IDA: Inferred from Direct Assay. Evidence codes from the Gene Ontology project [46].