Table 3.
Genome statistics
| Attribute | Value | % of Total |
|---|---|---|
| Genome size (bp) | 4,106,655 | 100.00% |
| DNA coding (bp) | 3,416,102 | 83.18% |
| DNA G + C (bp) | 1,142,131 | 27.81% |
| Number of scaffolds | 16 | |
| Total genes | 3,832 | 100.00% |
| Protein coding genes | 3,752 | 97.91% |
| RNA genes | 80 | 2.09% |
| Pseudo genes | 8a | |
| Genes in internal clusters | 2,960 | 76.77% |
| Genes with function prediction | 2,942 | 77.51% |
| Genes assigned to COGs | 2,456 | 64.09% |
| Genes with Pfam domains | 3,139 | 81.92% |
| Genes with signal peptides | 176 | 4.59% |
| Genes with transmembrane helices | 1,059 | 27.64% |
| CRISPR repeats | 0 |
aPseudo genes may also be counted as protein coding or RNA genes, so are not additive under total gene count.