Table 1. Top 20 dominant isomiRs across all samples.
name | top isomeric sequence | counts | total | percentage | isomirs | variant |
---|---|---|---|---|---|---|
bta-miR-486 | TCCTGTACTGAGCTGCCCCGA | 1339764 | 4497982 | 0.30 | 733 | lv3p |
bta-miR-22-3p | AAGCTGCCAGTTGAAGAACTGT | 665789 | 866536 | 0.77 | 152 | lv3p |
bta-miR-423-5p | TGAGGGGCAGAGAGCGAGACTTT | 409857 | 890481 | 0.46 | 300 | exact |
bta-miR-92a | TATTGCACTTGTCCCGGCCTGT | 325252 | 582925 | 0.56 | 288 | exact |
bta-miR-191 | CAACGGAATCCCAAAAGCAGCTG | 324529 | 502395 | 0.65 | 186 | exact |
bta-miR-30d | TGTAAACATCCCCGACTGGAAGCT | 131657 | 238102 | 0.55 | 138 | exact |
bta-miR-25 | CATTGCACTTGTCTCGGTCTGA | 117960 | 198545 | 0.59 | 104 | exact |
bta-miR-10b | TACCCTGTAGAACCGAATTTGT | 113970 | 236010 | 0.48 | 146 | lv3p |
bta-miR-140 | ACCACAGGGTAGAACCACGGAC | 106449 | 383774 | 0.28 | 354 | mv |
bta-miR-192 | CTGACCTATGAATTGACAGCC | 64586 | 207690 | 0.31 | 191 | lv3p |
bta-miR-423-3p | AGCTCGGTCTGAGGCCCCTCAGT | 55006 | 189431 | 0.29 | 184 | lv5p |
bta-miR-181a | AACATTCAACGCTGTCGGTGA | 45981 | 144760 | 0.32 | 104 | lv3p |
bta-miR-148a | TCAGTGCACTACAGAACTTTGT | 42423 | 60311 | 0.70 | 56 | exact |
bta-miR-6529a | GAGAGATCAGAGGCGCAGAGT | 39309 | 50349 | 0.78 | 45 | exact |
bta-miR-30e-5p | TGTAAACATCCTTGACTGGAAGCT | 38605 | 63314 | 0.61 | 65 | exact |
bta-miR-16b | TAGCAGCACGTAAATATTGGCG | 38479 | 47914 | 0.80 | 26 | mlv3p |
bta-miR-186 | CAAAGAATTCTCCTTTTGGGCT | 31118 | 71685 | 0.43 | 60 | exact |
bta-miR-27b | TTCACAGTGGCTAAGTTCTG | 29769 | 68708 | 0.43 | 46 | lv3p |
bta-miR-142-5p | CCCATAAAGTAGAAAGCACT | 27060 | 67172 | 0.40 | 65 | mv |
bta-miR-375 | TTTGTTCGTTCGGCTCGCGTGA | 25503 | 52553 | 0.49 | 61 | lv5p |