Table 1. Summary of outlier loci detected for American pika sampling sites along the Pyramid Peak (PP) and Thornton Lake (TL) elevational transects in North Cascades National Park.
| Locus | SNP | Transect | F ST a | Top blast hit (accession) | Abbreviated description |
|---|---|---|---|---|---|
| 21404_70 | C/T | PP | 0.315 | AC234826 | Ochotona princeps clone VMRC40-45K5 |
| 33398_46 | C/T | PP | 0.261 | XM004593395 | Ochotona princeps thioredoxin-related transmembrane protein 4 |
| 57863_76 | A/G | PP | 0.255 | NG008089.1 | Homo sapiens receptor tyrosine kinase-like orphan receptor 2 |
| 23902_347 | C/T | TL | 0.248 | AC237024 | Ochotona princeps clone VMRC40-172G4 |
| 46878_140 | C/G | TL | 0.234 | AC234901 | Oryctolagus cuniculus clone 0087B06 |
| 72966_67 | A/G | PP | 0.229 | AL358859 | Human DNA sequence from clone RP11-545G13 on chromosome 1 |
| 59691_160 | C/T | TL | 0.223 | AC234021 | Ochotona princeps clone VMRC40-93N24 |
| 23486_75 | A/C | TL | 0.209 | XM004585173 | Ochotona princeps hephaestin-like 1 |
| 110148_49 | A/G | TL | 0.196 | AC165118 | Oryctolagus cuniculus clone 16788057J9 |
| 94981_43 | A/T | PP | 0.194 | AC236101 | Ochotona princeps clone VMRC40-347J6 |
| 43241_27 | C/T | TL | 0.171 | AC233835 | Ochotona princeps clone VMRC40-526O13 |
| 108547_114 | A/T | TL | 0.165 | XM004587540 | Ochotona princeps platelet-derived growth factor receptor, beta |
| 87086_98 | C/G | TL | 0.155 | XM004593191 | Ochotona princeps putative uncharacterized protein FLJ46204-like |
| 28594_45 | C/T | TL | 0.153 | NG007853 | Homo sapiens laminin, alpha 3 |
Notes.
a
FST values significantly higher than under neutral expectations; averaged over populations.