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. 2015 Jul 1;16(7):14769–14785. doi: 10.3390/ijms160714769

Table 1.

Summary of rate constants measured for formation of binary hAgo2-guide, AaAgo-guide and hAgo2-PAZ9-guide complexes. Dissociation constants calculated from association and dissociation constants are displayed. Cartoons are based on hAgo2 X-ray structures with individual domains coloured. The guide substrate is depicted in blue with the 5′-end indicated by the phosphate group. Relative positions of the guide substrate are indicated. n.d. = values not determined in this study.

Collision Complex 5′-End Binding 3′-End Binding
graphic file with name ijms-16-14769-i001.jpg
Ago Protein k1_bin (M−1·s−1) k-1_bin (s−1) k 2_bin (s−1) k-2_bin (s−1) k3_bin (s−1) k-3_bin (s−1) KD_bin (nM) Reference
wt hAgo2 0.6 × 108 6.2 0.26 0.17 0.012 0.007 37 [46]
wt hAgo2 1.2 × 105 n.d. n.d. n.d. n.d. 0.007 57 [47]
AaAgo n.d. n.d. n.d. n.d. n.d. 0.004 10 [4,48]
hAgo2-PAZ9 0.2 × 108 7.8 0.18 0.024 49.5 [46]