Table 2.
Number of genes per benchmarked sample
| 1000 Genomes Project exomes | In-house exomes | |||
|---|---|---|---|---|
| AD | AR | AD | AR | |
| Before filtering | 10542 ± 783 | 10631 ± 802 | 19235 ± 916 | 19712 ± 976 |
| Exomiser filtered | 388 ± 110 | 38 ± 11 | 973 ± 104 | 557 ± 74 |
| PhenIX filtered | 388 ± 110 | 38 ± 11 | 973 ± 104 | 557 ± 74 |
| Exomiser filtered for eXtasy analysis | 388 ± 110 | 38 ± 11 | 973 ± 104 | 557 ± 74 |
| Phen-Gen filtered | 100 ± 34 | 5 ± 4 | 665 ± −86 | 331 ± 70 |
| Annovar filtered for Phevor analysis | 88 ± 36 | 2 ± 1 | 372 ± 61 | 52 ± 17 |
Abbreviations: AD autosomal dominant, AR autosomal recessive