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Number of significant differentially expressed genes (P < 0.05) per individual identified using Cuffdiff and DESeq
| Cuffdiff | DESeq | |||
|---|---|---|---|---|
| Differentially expressed genes (Raw RNA vs. WTA) | Percent of total shared genes between conditions | Differentially expressed genes (Raw RNA vs. WTA) | Percent of total shared genes between conditions | |
| Rat 1 | 0 | - | 20 | 0.11% |
| Rat 2 | 16 | 0.11% | 15 | 0.08% |
| Rat 3 | 19 | 0.14% | 23 | 0.13% |
| Rat 4 | 18 | 0.13% | 22 | 0.12% |
| Rat 5 | 0 | - | 22 | 0.12% |
| Rat 6 | 17 | 0.12% | 25 | 0.14% |
