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. 2015 Jul 31;16:242. doi: 10.1186/s12859-015-0661-6

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© Duforet-Frebourg et al. 2015

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — Mean percentage of Incorrect Assignment (MIA) for simulated data from a divergence model with 3 populations (see main text for details on simulations). Panel a: x axis represents the window sizes. Note that window size = 1 corresponds to using SNP genotype data to assign individuals to populations. Panel b: x axis represents the proportion of individuals in the samples that are used in the training set. The mean incorrect assignment of individuals is evaluated with individuals from the validation set that were not used to construct the haplotypes