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. 2015 Jul 31;10(7):e0133954. doi: 10.1371/journal.pone.0133954

Table 2. Inference of past demographic processes at the inferred genetic groups using software.

Wilcoxon test
All loci Loci in HWE
Inferred genetic group Mutation model Het. excess Het. deficiency Het. excess Het. deficiency Discarded loci
South-eastern Spain (n = 52; Alicante) TPM 0.99 0.02 0.96 0.05 Oe2-57, Oe054
SMM 0.99 0.01 0.98 0.04 Oe2-57, Oe054
South-western Spain (n = 96; Cádiz, Doñana, Sierra Norte, Sierra de Huelva) TPM 0.73 0.32 0.77 0.29 Oe2-57
SMM 0.98 0.03 0.97 0.04 Oe2-57
Central Spain (n = 78; Segovia, Toledo, Madrid, SE) TPM 0.62 0.42 0.66 0.42 Oe054, Bb101
SMM 0.97 0.03 0.78 0.28 Oe054, Bb101

Analyses were carried using one-tailed Wilcoxon’s tests under the stepwise mutation model (SMM) and the two-phase mutation model (TPM; variance = 3.1, proportion of multi-step mutation = 22%). Each analysis was repeated discarding those loci that showed a significant homozygote excess after Bonferroni correction (p < 0.05). Significant and marginally significant values in bold.