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. 2015 Mar 9;4(3):318–327. doi: 10.1002/open.201402132

Table 1.

Bonding analyses and populations for adenine—thymine (AT) and its smaller analogs.[a]

AT AT′ AT′′ A′T A′T′ A′T“ A”T A“T′ A”T“
Bond energy [kcal mol−1]
ΔE −16.7 −16.4 −15.2 −16.4 −16.0 −15.2 −16.2 −16.8 −16.1
ΔEprep 1.8 2.0 1.4 1.8 1.9 1.5 2.3 2.5 1.8
ΔEint −18.5 −18.4 −16.7 −18.3 −17.9 −16.7 −18.5 −19.4 −17.9
Bond energy decomposition [kcal mol−1]
ΔEPauli 39.9 39.4 32.0 38.6 37.9 31.3 38.2 38.2 32.3
ΔVelstat −31.9 −31.2 −27.3 −31.0 −30.0 −26.8 −31.2 −31.5 −28.4
ΔEdisp −5.4 −5.0 −3.9 −5.3 −4.9 −3.9 −4.1 −3.8 −3.4
ΔEoi −21.1 −21.6 −17.5 −20.5 −20.8 −17.2 −21.5 −22.2 −18.5
ΔEσ −19.5 −20.0 −15.9 −19.0 −19.3 −15.6 −19.7 −20.4 −16.6
ΔEπ −1.6 −1.6 −1.6 −1.5 −1.6 −1.6 −1.8 −1.9 −1.9
Gross populations of A [e]
σLUMO+1 0.01 0.01 0.01 0.01 0.01 0.02 0.02 0.02 0.02
σLUMO 0.01 0.01 0.02 0.02 0.01 0.02 0.01 0.01 0.01
σHOMO 1.95 1.95 1.97 1.96 1.95 1.97 1.88 1.87 1.91
σHOMO−1 1.97 1.97 1.98 1.96 1.96 1.98 2.00 2.00 2.00
Gross populations of T [e]
σLUMO+1 0.04 0.00 0.03 0.03 0.01 0.03 0.06 0.01 0.04
σLUMO 0.01 0.08 0.02 0.01 0.08 0.02 0.01 0.10 0.03
σHOMO 1.97 1.98 1.95 1.97 1.98 1.95 1.97 1.98 1.95
σHOMO−1 1.99 1.97 2.00 1.99 1.97 2.00 1.99 1.98 2.00

[a] Energies and geometries computed at BLYP-D3(BJ)/TZ2P in Cs symmetry for the pair and C1 for monomer.