Table 1. Statistics for exome sequencing sixteen dogs.
Sample | Pool | Total reads | Mapped reads | Duplicate reads | Remaining reads | Remaining (%) | Sequencing depth (x) |
---|---|---|---|---|---|---|---|
1 | 1 | 284,357,886 | 264,735,195 | 9,414,179 | 255,321,016 | 89.8 | 85.8 |
2 | 1 | 281,522,490 | 261,170,320 | 9,366,318 | 251,804,002 | 89.4 | 84.3 |
3 | 1 | 249,659,670 | 231,433,861 | 7,819,714 | 223,614,147 | 89.6 | 75.4 |
4 | 1 | 181,728,820 | 168,679,105 | 4,382,284 | 164,296,821 | 90.4 | 55.5 |
5 | 2 | 266,996,086 | 251,028,902 | 17,002,907 | 234,025,995 | 87.7 | 75.3 |
6 | 2 | 187,857,302 | 176,207,940 | 12,226,544 | 163,981,396 | 87.3 | 53.9 |
7 | 2 | 233,403,500 | 216,361,182 | 13,330,685 | 203,030,497 | 87.0 | 65.0 |
8 | 2 | 314,005,584 | 289,641,450 | 23,514,154 | 266,127,296 | 84.8 | 82.9 |
9 | 3 | 262,726,150 | 246,019,167 | 14,919,187 | 231,099,980 | 88.0 | 74.8 |
10 | 3 | 181,120,464 | 169,294,819 | 10,140,076 | 159,154,743 | 87.9 | 51.6 |
11 | 3 | 269,017,896 | 247,287,291 | 16,377,215 | 230,910,076 | 85.8 | 73.1 |
12 | 3 | 243,350,554 | 227,421,662 | 12,820,659 | 214,601,003 | 88.2 | 69.5 |
13 | 4 | 154,004,914 | 142,631,944 | 9,095,086 | 133,536,858 | 86.7 | 42.6 |
14 | 4 | 193,942,804 | 175,552,484 | 13,670,936 | 161,881,548 | 83.5 | 50.1 |
15 | 4 | 221,094,842 | 204,380,382 | 15,086,795 | 189,293,587 | 85.6 | 59.5 |
16 | 4 | 364,079,702 | 337,983,155 | 31,679,889 | 306,303,266 | 84.1 | 93.9 |