Table 1.

Name of the breeds, breed acronyms, sample size before (n-PreQC) and after (n-PostQC) genotyping quality control procedures, expected heterozygosity (H_E), observed heterozygosity (H_O), Wright’s inbreeding coefficient (F_IS), and proportion of polymorphic SNPs (P_N)

Breed name	Breed code	n-PreQC	n-PostQC	HE	HO	FIS	PN
Valdostana	VAL	24	24	0.37	0.36	0.05	98.20
Camosciata delle Alpi	CAM	31	30	0.40	0.40	0.02	99.70
Saanen	SAA	24	24	0.41	0.41	−0.001	99.66
Orobica	ORO	24	23	0.35	0.35	0.01	96.89
Bionda dell’Adamello	BIO	24	24	0.40	0.40	0.02	99.45
Valpassiria or Passeirer Gebirgziege	VPS	24	24	0.40	0.40	0.02	99.41
Ciociara Grigia	CGI	19	19	0.40	0.39	0.06	99.29
Di Teramo	TER	23	23	0.35	0.38	−0.06	95.13
Dell’Aspromonte	ASP	24	24	0.40	0.38	0.06	99.38
Nicastrese	NIC	25	24	0.40	0.38	0.07*	99.37
Argentata dell’Etna	ARG	25	24	0.41	0.41	0.02	99.63
Girgentana	GIR	24	24	0.36	0.36	0.004	96.55
Maltese from Sicily	MAL	16	16	0.37	0.36	0.06	97.87
Sarda	SAR	32	32	0.41	0.39	0.06	99.64
Maltese from Sardinia	SAM	15	15	0.36	0.36	0.02	96.76

^* P < 0.05