Table 5.
GO analyses showing that miRNAs from Malus hupehensis leaves potentially target the juvenile to adult transition-related biological processes
| miRNAs | GO biological process | GO ID | P value | Targets | Target number |
|---|---|---|---|---|---|
| 156 ,160,162,398 | growth | GO:0040007 | 0.0005 | MDP0000146640,MDP0000155354,MDP0000131481,MDP0000221322; | 8 |
| MDP0000256621, MDP0000187512, MDP0000308890,MDP0000193167 | |||||
| 166,167,393 | developmental maturation | GO:0021700 | 2.60E-20 | MDP0000005879; MDP0000126553,MDP0000319957,MDP0000137461 | 7 |
| MDP0000125975,MDP0000203334,MDP0000268652 | |||||
| 162,166,398 | regulation of developmental growth | GO:0048638 | 1.20E-12 | MDP0000187512,MDP0000943529,MDP0000426630,MDP0000308890 | 5 |
| MDP0000193196 | |||||
| 156, 162,166 | developmental growth | GO:0048589 | 1.10E-09 | MDP0000119458,MDP0000155354,MDP0000249364,MDP0000187512 | 5 |
| MDP0000005879 | |||||
| 160,164,167,393 | auxin mediated signaling pathway | GO:0009734 | 1.90E-18 | MDP0000131481,MDP0000221322,MDP0000256621,MDP0000298182; | 8 |
| MDP0000528658,MDP0000319957,MDP0000125975,MDP0000203334 | |||||
| 159,160, 393 | hormone-mediated signaling pathway | GO:0009755 | 5.10E-10 | MDP0000147309,MDP0000131481,MDP0000221322,MDP0000125975, | 6 |
| MDP0000203334,MDP0000268652 | |||||
| 159,160,399,858 | response to abscisic acid stimulus | GO:0009737 | 3.0E-10 | MDP0000147309,MDP0000131481,MDP0000256621,MDP0000143276 | 6 |
| MDP0000166425,MDP0000318013 | |||||
| 164,166,167,393 | response to auxin stimulus | GO:0009733 | 3.10E-11 | MDP0000298182,MDP0000005879,MDP0000319957,MDP0000125975 | 6 |
| MDP0000203334,MDP0000268652 | |||||
| 156,169,172,393 | flower development | GO:0009908 | 6.30E-22 | MDP0000146640,MDP0000155354,MDP0000297978,MDP0000164531, | 9 |
| MDP0000296716,MDP0000137561,MDP0000125975,MDP0000203334 | |||||
| MDP0000268652 | |||||
| 160,166,167 | floral organ development | GO:0048437 | 2.00E-23 | MDP0000131481,MDP0000221322,MDP0000256621,MDP0000153538 | 5 |
| MDP0000268306 | |||||
| 156,393,858 | androecium development | GO:0048466 | 1.60E-10 | MDP0000146640,MDP0000155354,MDP0000297978,MDP0000249364, | 14 |
| MDP0000125975,MDP0000203334,MDP0000268652,MDP0000143276 | |||||
| MDP0000140609.MDP0000931057 | |||||
| 156,393,858 | stamen development | GO:0048443 | 1.60E-10 | MDP0000146640,MDP0000155354,MDP0000297978,MDP0000249364, | 14 |
| MDP0000125975,MDP0000203334,MDP0000268652,MDP0000143276 | |||||
| MDP0000140609.MDP0000931057 | |||||
| 172 | specification of floral organ identity | GO:0010093 | 6.90E-06 | MDP0000163645,MDP0000181606, MDP0000200319,MDP0000296716 | 5 |
| MDP0000137561 | |||||
| 156 | anther development | GO:0048653 | 2.40E-05 | MDP0000146640; MDP0000171877,MDP0000155354,MDP0000297978 | 6 |
| MDP0000322647,MDP0000249364 | |||||
| 172 | floral organ formation | GO:0048449 | 0.00099 | MDP0000163645,MDP0000181606, MDP0000200319,MDP0000296716 | 5 |
| MDP0000137561 | |||||
| 172 | floral organ morphogenesis | GO:0048444 | 0.0038 | MDP0000163645,MDP0000181606, MDP0000200319,MDP0000296716 | 5 |
| MDP0000137561 | |||||
| 166,167,169,858 | regulation of flower development | GO:0009909 | 0.00012 | MDP0000050082,MDP0000319957,MDP0000164531,MDP0000143276 | 5 |
| MDP0000887107 | |||||
| 156,160,164,166, | reproductive structure development | GO:0048608 | 8.20E-17 | MDP0000146640,MDP0000155354,MDP0000297978,MDP0000131481, | 8 |
| MDP0000221322,MDP0000256621,MDP0000298182,MDP0000005879 | |||||
| 167,168,169,172 | reproductive process | GO:0022414 | 2.70E-13 | MDP0000153538,MDP0000137461, MDP0000232417,MDP0000069525, | 7 |
| MDP0000161046,MDP0000164531,MDP0000296716 | |||||
| 3627,393,398,858 | reproductive developmental process | GO:0003006 | 3.70E-17 | MDP0000133746,MDP0000258197,MDP0000125975,MDP0000203334 | 8 |
| MDP0000268652,MDP0000308890,MDP0000193167,MDP0000143276 | |||||
| 159,172 | sexual reproduction | GO:0019953 | 0.14 | MDP0000147309,MDP0000163645,MDP0000181606,MDP0000200319, | 6 |
| MDP0000296716,MDP0000137561 | |||||
| 172 | specification of organ identity | GO:0010092 | 6.90E-06 | MDP0000163645,MDP0000181606, MDP0000200319,MDP0000296716 | 5 |
| MDP0000137561 | |||||
| 160,162,164 | organ development | GO:0048513 | 3.10E-26 | MDP0000131481, MDP0000221322,MDP0000256621,MDP0000273491, | 7 |
| MDP0000187512,MDP0000298182, MDP0000528658 | |||||
| 156,159, 858 | leaf development | GO:0048366 | 5.90E-12 | MDP0000146640,MDP0000155354,MDP0000297978,MDP0000249364, | 6 |
| MDP0000147309, MDP0000143276 | |||||
| 156, 3627,393 | shoot development | GO:0048367 | 4.60E-13 | MDP0000155354,MDP0000297978,MDP0000133746,MDP0000258197, | 7 |
| MDP0000125975,MDP0000203334,MDP0000268652 | |||||
| 159,166, 858 | leaf morphogenesis | GO:0009965 | 4.60E-13 | MDP0000147309,MDP0000005879,MDP0000050082,MDP0000133817, | 5 |
| MDP0000143276 | |||||
| 166,167,168 | xylem and phloem pattern formation | GO:0010051 | 2.70E-14 | MDP0000005879,MDP0000319957,MDP0000153538,MDP0000137461, | 5 |
| MDP0000069525 | |||||
| 160, 393,828 | root development | GO:0048364 | 7.60E-22 | MDP0000131481, MDP0000221322,MDP0000256621,MDP0000125975 | 8 |
| MDP0000203334,MDP0000268652,MDP0000143276,MDP0000253904 | |||||
| 169,172,858 | fruit development | GO:0010154 | 6.50E-06 | MDP0000296077,MDP0000296716,MDP0000137561,MDP0000143276, | 6 |
| MDP0000140609,MDP0000887107 | |||||
| 156,159,160 | phyllome development | GO:0048827 | 1.80E-11 | MDP0000155354,MDP0000297978,MDP0000249364,MDP0000147309 | 5 |
| MDP0000778465 | |||||
| 156,162, 858 | tissue development | GO:0009888 | 5.30E-21 | MDP0000146640,MDP0000155354,MDP0000297978,MDP0000187512, | 5 |
| MDP0000143276 | |||||
| 164, 168,172 | meristem development | GO:0048507 | 6.30E-27 | MDP0000298182, MDP0000528658,MDP0000069525,MDP0000161046, | 6 |
| MDP0000296716,MDP0000137561 | |||||
| 156,162,166 | regulation of meristem development | GO:0048509 | 1.30E-08 | MDP0000146640,MDP0000155354,MDP0000297978,MDP0000187512 | 6 |
| MDP0000005879,MDP0000126553 | |||||
| 164, 167,168 | meristem structural organization | GO:0009933 | 8.40E-15 | MDP0000298182,MDP0000550049,MDP0000232417,MDP0000069525, | 5 |
| MDP0000305971 | |||||
| 162,166 | meristem growth | GO:0035266 | 3.40E-10 | MDP0000187512,MDP0000298182, MDP0000528658,MDP0000050082, | 5 |
| MDP0000943529 |