Table 2.
Numbers of genes in the primary predicted host–fungal PPI networks belonging to the biological process GO filter terms.
| (A) Filter terms for host side | |||||
|---|---|---|---|---|---|
| GO slim biological process terms | Number of genes in H. sapiens | Number of genes in M. musculus | |||
| Signal transduction | 951 | 602 | |||
| Immune system process | 491 | 255 | |||
| Symbiosis, encompassing mutualism through parasitism | 260 | 0 | |||
| Cell adhesion | 151 | 127 | |||
| Circulatory system process | 50 | 53 | |||
| Only Other Slim BP annotations | 1,246 | 878 | |||
| No GOSlim BP annotation | 0 | 0 | |||
| (B) Filter terms for fungi side | |||||
| GO slim biological process terms | Number of genes in A. fumigatus | Number of genes in C. albicans | |||
| Pathogenesis | 30 | 33 | |||
| Cell adhesion | 10 | 24 | |||
| Biofilm formation | 0 | 32 | |||
| Interspecies interaction between organisms | 0 | 30 | |||
| Growth of unicellular organism as a thread of attached cells | 0 | 2 | |||
| Only Other Slim BP annotations | 330 | 244 | |||
| No GOSlim BP annotation | 0 | 0 | |||
| (C) Sizes of host-fungi networks after functional refinement | |||||
| Host species | Pathogen species | Number of host–pathogen interactions | Number of host interactors | Number of pathogen interactors | |
| H. sapiens | A. fumigatus | 1,137 (6.4%) | 607 (25.4%) | 33 (9.1%) | |
| H. sapiens | C. albicans | 3,025 (19.7%) | 840 (39.6%) | 57 (18.9%) | |
| M. musculus | A. fumigatus | 590 (6.4%) | 355 (22.6%) | 26 (7.7%) | |
| M. musculus | C. albicans | 1,462 (18.2%) | 461 (33.5%) | 41 (14.5%) | |