Skip to main content
. 2015 Aug 4;6:764. doi: 10.3389/fmicb.2015.00764

Table 2.

Numbers of genes in the primary predicted host–fungal PPI networks belonging to the biological process GO filter terms.

(A) Filter terms for host side

GO slim biological process terms Number of genes in H. sapiens Number of genes in M. musculus
Signal transduction 951 602
Immune system process 491 255
Symbiosis, encompassing mutualism through parasitism 260 0
Cell adhesion 151 127
Circulatory system process 50 53
Only Other Slim BP annotations 1,246 878
No GOSlim BP annotation 0 0

(B) Filter terms for fungi side

GO slim biological process terms Number of genes in A. fumigatus Number of genes in C. albicans

Pathogenesis 30 33
Cell adhesion 10 24
Biofilm formation 0 32
Interspecies interaction between organisms 0 30
Growth of unicellular organism as a thread of attached cells 0 2
Only Other Slim BP annotations 330 244
No GOSlim BP annotation 0 0

(C) Sizes of host-fungi networks after functional refinement

Host species Pathogen species Number of host–pathogen interactions Number of host interactors Number of pathogen interactors

H. sapiens A. fumigatus 1,137 (6.4%) 607 (25.4%) 33 (9.1%)
H. sapiens C. albicans 3,025 (19.7%) 840 (39.6%) 57 (18.9%)
M. musculus A. fumigatus 590 (6.4%) 355 (22.6%) 26 (7.7%)
M. musculus C. albicans 1,462 (18.2%) 461 (33.5%) 41 (14.5%)