TABLE 4.
Locus | Length (bp) |
% GC content | No. of polymorphic sites | dN/dS ratio | No. of unique alleles | ||
---|---|---|---|---|---|---|---|
Gene | Amplicon | Sequence analyzed | |||||
atpA | 1,503 | 1,141 | 393 | 41.52 | 32 | 0.008 | 10 |
bcaT | 1,047 | 493 | 320 | 39.47 | 45 | 0.029 | 8 |
pepN | 1,023 | 482 | 491 | 33.53 | 52 | 0.255 | 8 |
pepX | 2,269 | 602 | 401 | 39.35 | 85 | 0.076 | 9 |
rpoA | 939 | 721 | 531 | 40.19 | 13 | 0.092 | 12 |
pheS | 2,533 | 618 | 361 | 41.51 | 36 | 0.010 | 9 |
16S rRNA | 1,548 | 1,465 | 531 | 49.30 | 2 | –a | 5 |
–, not determined.