Table 1.
The efficiency of inversions, duplications, and deletions by CRISPR with a pair of sgRNAs.
DNA fragment | β-globin RE1 | Pcdh RE1 | β-globin RE2 | HoxD locus | β-globin locus | Pcdhα cluster | Pcdh α, β, and γ clusters |
---|---|---|---|---|---|---|---|
(size in bp) | (709) | (1272) | (6277) | (18142) | (80732) | (256744) | (807480) |
Inversion (%) | 21.12 ± 4.99 | 23.28 ± 2.42 | 23.13 ± 1.13 | 7.28 ± 1.60 | 5.96 ± 0.28 | 5.48 ± 0.37 | 0.71 ± 0.12 |
Duplication (%) | ND | 0.23 ± 0.12 | 5.30 ± 1.19 | ND | 5.97 ± 0.33 | 0.61 ± 0.02 | 0.17 ± 0.03 |
Deletion (%) | 28.33 ± 6.19 | 17.51 ± 1.04 | 34.49 ± 3.57 | 9.15 ± 0.11 | 13.39 ± 0.80 | 8.46 ± 0.24 | 0.47 ± 0.08 |
ND, not detectable. Efficiency = mean ± SD.