Table 1. Chromosome wise coverage of repetitive elements.

Coverage of different repeat super-families was calculated as the percentage of nucleotides represented by repetitive elements out of total nucleotides of every chromosome.

Solanum tuberosum
Chromosome	Total number of base pairs occupied by repeats	Total number of base pairs in the chromosome	Percentage of chromosome occupied by repeats
chr0	33,415,365	85,736,662	38.97
chr1	43,197,010	88,663,952	48.72
chr2	19,955,974	48,614,681	41.05
chr3	28,514,945	62,190,286	45.85
chr4	36,487,020	72,208,621	50.53
chr5	27,570,804	52,070,158	52.95
chr6	28,789,650	59,532,096	48.36
chr7	28,734,258	56,760,843	50.62
chr8	28,479,417	56,938,457	50.02
chr9	32,022,384	61,540,751	52.03
chr10	32,804,959	59,756,223	54.90
chr11	21,872,185	45,475,667	48.10
chr12	33,669,946	61,165,649	55.05
Total	395,513,917	810,654,046	48.79
Solanum lycopersicum
Chromosome	Total number of base pairs occupied by repeats	Total number of base pairs in the chromosome	Percentage of chromosome occupied by repeats
chr0	14,457,253	21,805,821	66.30
chr1	52,060,945	90,304,244	57.65
chr2	24,994,446	49,918,294	50.07
chr3	36,771,573	64,840,714	56.71
chr4	37,594,132	64,064,312	58.68
chr5	41,130,811	65,021,438	63.26
chr6	24,862,196	46,041,636	54.00
chr7	41,046,411	65,268,621	62.89
chr8	39,637,992	63,032,657	62.88
chr9	43,430,035	67,662,091	64.19
chr10	40,148,283	64,834,305	61.92
chr11	31,877,585	53,386,025	59.71
chr12	42,301,100	65,486,253	64.60
Total	470,312,762	781,666,411	60.17