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. 2015 Aug 4;10(8):e0134512. doi: 10.1371/journal.pone.0134512

Table 3. Summary of characters of the nine Gordonia phage genomes.

Phage name Average coverage (fold) Total read count Genome size (bp) G+C content (mol %) No. putative tRNA No. putative genes No. putative genes in forwards orientation No. functionally annotated putative genes No. novel genes No. palindromes No. direct repeats No. inverted repeats
GMA2 a c 1, 212 336, 750 103, 424 53.4 16 126 42 42 62 7 22 10
GMA3 b e d 1, 200 677, 981 77, 779 51.3 0 104 32 27 47 16 18 8
GMA4 b e d 1, 981 716, 641 45, 537 66.4 1 68 61 22 11 6 40 31
GMA5 b f d 6, 793 930, 480 17, 562 66.4 0 28 24 14 4 11 28 13
GMA6 a c 247 55, 269 83, 324 58.2 0 115 109 38 68 1 20 3
GMA7 b c 1, 603 947, 843 73, 419 56.6 1 101 32 23 5 18 14 5
GRU3 b e d 520 89, 131 17, 727 66.5 0 26 23 12 6 3 42 16
GTE6 a c 915 141, 321 56, 982 67.8 0 86 86 23 49 3 252 87
GTE8 b c 1, 605 777, 336 67, 617 66.0 0 94 67 23 22 5 48 36

a sequenced using 454,

b sequenced using Illumina,

c reads assembled using CLC workbench (v6.5.1),

d reads assembled using CLC workbench (v7.5.1),

e reads assembled using Spades (v3.1.0),

f reads assembled using ABySS (v1.3.7).