Table 1. Known miRNA families identified in M. incognita.
Name | Mature | Length | GC% | Reads number |
---|---|---|---|---|
miR-71 | ugaaagacauggguaguugaga | 22 | 40.9% | 3489388 |
miR-100b | aacccguagauccgaacuagucu | 23 | 47.8% | 2870101 |
miR-124 | uaaggcacgcggugaaug | 18 | 55.6% | 1639977 |
miR-1 | uggaauguaaagaaguau | 18 | 27.8% | 880854 |
miR-72 | aggcaagauguuggcauugcuga | 23 | 47.8% | 495031 |
miR-92 | uauugcacucguuucggccu | 20 | 50.0% | 313210 |
miR-252 | cuaaguaguagugccgcauuuaa | 23 | 39.1% | 65196 |
miR-2a | uaucacagccugcuuuagcgua | 22 | 45.5% | 57375 |
miR-87 | gugagcaaaguuucaggugugc | 22 | 50.0% | 42872 |
miR-100a | uacccguagauccgaacuaguc | 22 | 50.0% | 28784 |
miR-2b | uaucacaguucgauauggcc | 20 | 45.0% | 25154 |
miR-50 | ugauaugucuuguauucuug | 20 | 30.0% | 20539 |
miR-184 | uggacggaagucugauaaggag | 22 | 50.0% | 17866 |
miR-81 | ugagaucauaccagaucac | 19 | 42.1% | 15488 |
miR-86 | uaagugaauaucuugccacaagcu | 24 | 37.5% | 9234 |
miR-279 | ugacuagauccacacucaucu | 21 | 42.9% | 9908 |
miR-137 | agguauucuccguggugaugaca | 23 | 47.8% | 6368 |
miR-59 | acgaaucguuugcacaucgguguu | 24 | 45.8% | 6103 |
miR-79 | auaaagcuagauuaccagag | 20 | 35.0% | 5635 |
miR-67 | ucacaacccccuagaguucgcua | 23 | 52.2% | 5292 |
miR-239 | uuuguacuagccaaaaugucugca | 24 | 37.5% | 4576 |
miR-36 | ucaccgggaauuuauucaug | 20 | 40.0% | 698 |
let-7 | ugagguaguagguuguauaguu | 22 | 36.4% | 223 |
miR-242 | uugcguaggcaucuugucag | 20 | 50.0% | 121 |
miR-240 | cacuggccuuucaaaccu | 18 | 50.0% | 60 |
miR-76 | uucguuguuucugaaaccugaa | 22 | 36.4% | 12 |
miR-790 | acgguuugacaaaguuau | 18 | 33.3% | 9 |