Table 1.
Thermal cycling programs and primers used to generate DNA fingerprints using Rep-PCR.
Rep PCR | Primers | Thermal cycle |
---|---|---|
BOX | BOXA1R: 5′CTACGGCAAGGCGACGCTGACG | 94°C 3 min 94°C 30 s × 35 52°C 30 s × 35 68°C 8 min × 35 68°C 15 min × 35 4°C hold |
ERIC | ERIC1R: 5′ATGTAAGCTCCTGGGGATTCAC ERIC 2: 5′AAGTAAGTGACTGGGGTGAGCG |
94°C 3 min 94°C 30 s × 35 52°C 30 s × 35 68°C 8 min × 35 68°C 15 min × 35 4°C hold |
REP | REPR: 5′TTCGCYGGCAAGCCRGCTCC REP F: 5′GGCTTGCCRGCGAARRGGCC |
94°C 3 min 94°C 30 s × 35 65°C 30 s × 35 72°C 8 min × 35 72°C 15 min × 35 4°C hold |