Table 2. Summary statistics of the de novo EAB transcriptome assembly.
Statistics | |
---|---|
Number of Reads Used in Assembly | 598,478,160 |
Number of Contigs | 88,907 |
Total Size of Contigs (Mb) | 201.8 |
Number of Unigenes | 38,160 |
Total Size of Unigenes (Mb) | 47.3 |
Mean Unigene size (bp) | 1,241 |
Median Unigene size (bp) | 874 |
Min Unigene Size (bp) | 300 |
Max Unigene Size (bp) | 32,109 |
N25 (bp) | 5,350 |
N50 (bp) | 2,516 |
N75 (bp) | 848 |
Number of Unigene > 1 Kb | 11,251 |
Number of Unigene > 5 Kb | 1,722 |
Number of Unigene > 10 Kb | 225 |
Number of Predicted ORFs | 15,079 |
NR Database Nnnotated Unigenes | 10,975 |
Swissprot Database Annotated Unigenes | 8,446 |
COG Classified Unigenes | 7,080 |