Skip to main content
. 2015 Aug 5;10(8):e0134911. doi: 10.1371/journal.pone.0134911

Table 1. Most significantly upregulated genes at more than one time point (non-coding RNAs are indicated with *) (Bonferroni-adjusted p-value <0.0001).

Time points Gene symbol Accession number Description
6, 12 and 24h FDXR NM_004110 ferredoxin reductase, nuclear gene encoding mitochondrial protein
EPHA2 NM_004431 EPH receptor A2
RPL6 NM_001024662 ribosomal protein L6
VWCE NM_152718 von Willebrand factor C and EGF domains
UBD NM_006398 ubiquitin D
CXCL1 NM_001511 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)
MDM2 NM_002392 Mdm2 p53 binding protein homolog (mouse), transcript variant MDM2
RPL41 NM_001035267 ribosomal protein L41
TNFRSF10C NM_003841 tumor necrosis factor receptor superfamily, member 10c
DDB2 NM_000107 damage-specific DNA binding protein 2, 48kDa
GRM2 NM_000839 glutamate receptor, metabotropic 2
TP53I3 NM_004881 tumor protein p53 inducible protein 3
ISCU NM_014301 iron-sulfur cluster scaffold homolog (E. coli)
6 and 12h GADD45A NM_001924 growth arrest and DNA-damage-inducible, alpha
PLK3 NM_004073 polo-like kinase 3
BTG2 NM_006763 BTG family, member 2
TRIAP1 NM_016399 TP53 regulated inhibitor of apoptosis 1
PIDD NM_145886 p53-induced death domain protein
CDKN1A NM_078467 cyclin-dependent kinase inhibitor 1A (p21, Cip1)
TP53INP1 NM_033285 tumor protein p53 inducible nuclear protein 1
SESN1 THC2527965 Sestrin 1, partial (68%)
BAG1 NM_004323 BCL2-associated athanogene
XPC NM_004628 xeroderma pigmentosum, complementation group C
*lincRNA chrX:64042150–64093950
12 and 24h RPS2 NM_002952 ribosomal protein S2
RPL26 THC2550570 ribosomal protein L26, partial (91%)
PLXNB2 NM_012401 plexin B2
KRT17 NM_000422 keratin 17
ACTA2 NM_001613 actin, alpha 2, smooth muscle, aorta
SULF2 NM_018837 sulfatase 2
PVRL4 NM_030916 poliovirus receptor-related 4
CSRP2 NM_001321 cysteine and glycine-rich protein 2
DRAM1 NM_018370 DNA-damage regulated autophagy modulator 1
BBC3 NM_014417 BCL2 binding component 3
*LOC344887 NR_033752 NmrA-like family domain containing 1 pseudogene, non-coding RNA
RELB NM_006509 v-rel reticuloendotheliosis viral oncogene homolog B
*LOC642335 AK098072 cDNA FLJ40753 fis, clone TRACH2001188.
KIAA1324 NM_020775 KIAA1324
NOV NM_002514 nephroblastoma overexpressed gene
RPS27L NM_015920 ribosomal protein S27-like
PRODH NM_016335 proline dehydrogenase (oxidase) 1, nuclear gene encoding mitochondrial protein
6 and 24h GDF15 NM_004864 growth differentiation factor 15
NFKBIA NM_020529 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha