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. 2015 Jun 25;290(32):19726–19742. doi: 10.1074/jbc.M115.653014

TABLE 3.

Kinetic parameters of pre-steady-state PHD2- and FIH-catalyzed hydroxylation

Conditions were as follows: an anaerobically prepared mixture of 0.8 mm PHD2, 1 mm peptide substrate, 5 mm 2OG, and 0.7 mm Fe(II) or 0.5 mm FIH, 1 mm peptide substrate, 5 mm 2OG, and 0.4 mm Fe(II) in 50 mm HEPES (pH 7.5) was rapidly mixed with O2-saturated buffer at 5 °C. ND, not determined.

Enzyme Substrate Stopped-flow, 520 nm (PHD2), 500 nm (FIH)
Rapid quench-flow
kfall phase krise phase kproduct ksuccinate
s1 s1 s1 s1
PHD2 CODD HIF-1α 0.040 ± 0.007 0.015 ± 0.005 0.0155 ± 0.0012 0.0130 ± 0.0020
PHD2 CODD HIF-2α 0.450 ± 0.010 0.027 ± 0.001 0.0124 ± 0.0030 0.0120 ± 0.0070
PHD2 NODD HIF-1α 0.178 ± 0.006 0.002 ± 0.001 0.0080 ± 0.0020 0.0060 ± 0.0010
PHD2 NODD HIF-2α 0.195 ± 0.009 0.003 ± 0.001 0.0199 ± 0.0032 0.0270 ± 0.0060
FIH CAD HIF-1α35-mer 4.5 ± 0.3 0.009 ± 0.005 0.33 ± 0.07 0.3 ± 0.1
FIH CAD HIF-2α35-mer 4.9 ± 0.2 0.017 ± 0.01 0.12 ± 0.01 0.11 ± 0.03
FIH CAD HIF-1α19-mer ND ND 0.013 ± 0.003 0.016 ± 0.004