Table I. GO category enrichment of genes showing negative correlation between methylation change and expression change.
A total of 318 genes across five comparisons between consecutive developmental stages were analyzed (Pearson correlation coefficient < −0.6 and P < 0.05).
| GO Identifier | GO Name | Query Number | Hyper P Value | Fold Change (Log2) | Entries |
|---|---|---|---|---|---|
| GO:0006886 | Intracellular protein transport | 6 | 1.80E-03 | 4.55 | Os01g24060 |
| Os03g10370 | |||||
| Os03g27450 | |||||
| Os07g12170 | |||||
| Os07g48880 | |||||
| Os12g37360 | |||||
| GO:0007264 | Small GTPase-mediated signal transduction | 4 | 4.10E-03 | 5.95 | Os03g10370 |
| Os03g27450 | |||||
| Os07g12170 | |||||
| Os12g37360 | |||||
| GO:0055114 | Oxidation reduction | 15 | 4.50E-03 | 2.03 | Os01g22370 |
| Os02g08230 | |||||
| Os02g30714 | |||||
| Os02g47470 | |||||
| Os02g51880 | |||||
| Os03g45519 | |||||
| Os04g06790 | |||||
| Os04g20164 | |||||
| Os04g46960 | |||||
| Os06g42000 | |||||
| Os06g46680 | |||||
| Os06g46799 | |||||
| Os07g32570 | |||||
| Os10g30140 | |||||
| Os12g34874 | |||||
| GO:0045454 | Cell redox homeostasis | 3 | 3.94E-02 | 3.69 | Os02g51370 |
| Os06g42000 | |||||
| Os07g32570 | |||||
| GO:0015031 | Protein transport | 4 | 4.75E-02 | 2.65 | Os03g10370 |
| Os03g27450 | |||||
| Os07g12170 | |||||
| Os12g37360 |