Table 5. Frequency distribution of SSRs by motif length in the C.hongkongensis transcriptome.
SSR motif length | Repeat unit number | ||||||||
---|---|---|---|---|---|---|---|---|---|
5 | 6 | 7 | 8 | 9 | 10 | >10 | Total | % | |
Di | - | 439 | 187 | 107 | 62 | 43 | 225 | 1,063 | 62.5% |
Tri | 331 | 119 | 39 | 28 | 16 | 10 | 10 | 553 | 32.5% |
Tetra | 32 | 17 | 10 | 3 | 0 | 0 | 7 | 69 | 4.1% |
Penta | 7 | 4 | 1 | 1 | 0 | 0 | 0 | 13 | 0.07% |
Hexa | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.005% |
Total | 371 | 579 | 237 | 139 | 78 | 53 | 242 | 1699 | 100% |