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. 2015 Aug 6;16(1):157. doi: 10.1186/s13059-015-0721-2

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© Emms and Kelly. 2015

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 5 — Inference of orthogroups of plant transcription factors. In all cases dark grey bars indicate the results for OrthoFinder and light grey bars indicate the results for OrthoMCL. a Comparison of the fraction of transcription factors that are assigned to orthogroups by OrthoFinder and by OrthoMCL. b Comparison of the number of transcription factor orthogroups identified using each method. c The percentage of RBNH/RBH (for OrthoFinder/OrthoMCL) hits that are not contained in orthogroups identified using each method. d The number of transcription factors of the same type that each transcription factor is connected to in the orthogroups produced by OrthoFinder. e as in (d) but for OrthoMCL. f Comparison of species coverage for transcription factor orthogroups identified by each method. g The number of orthogroups for each transcription factor type identified by OrthoFinder