Table 4. Co-expression analysis of SAGA component genes in Arabidopsis.
| S.N. | LOCUS1 | LOCUS2 | Mutual Rank (MR) a | ||||||
|---|---|---|---|---|---|---|---|---|---|
| All | Tissue | Abiotic | Biotic | Hormone | |||||
| 1 | At1g04950 | TAF6 | At4g16420 | ADA2B | 42.5 | 706.1 | 469.5 | 2967.2 | 59.4 |
| 2 | At1g02680 | TAF13 | At4g16420 | ADA2B | 47 | 143.4 | 451.7 | 706.6 | 10.2 |
| 3 | At1g72390 | SPT20 | At4g16420 | ADA2B | 59 | 625.7 | 59.7 | 532.6 | 555.5 |
| 4 | At5g10790 | UBP22 | At5g40550 | SGF29B | 100 | 4698.1 | 223.4 | 3121.7 | 8550.2 |
| 5 | At1g04950 | TAF6 | At2g17930 | TRA1A | 137.2 | 150.1 | 1762 | 849.3 | 3776.9 |
| 6 | At1g02680 | TAF13 | At2g17930 | TRA1A | 158.3 | 24.1 | 6755.4 | 1645.4 | 6751.4 |
| 7 | At1g72390 | SPT20 | At4g29790 | ADA3 | 164.7 | 121.5 | 720.7 | 2500.2 | 1786.6 |
| 8 | At1g32750 | TAF1B | At4g16420 | ADA2B | 187 | 554.3 | 613.6 | 2615.8 | 10053.6 |
| 9 | At2g13370 | CHR5 | At4g16420 | ADA2B | 187.3 | 1798.5 | 270.9 | 358.2 | 2263.7 |
| 10 | At1g54140 | TAF9 | At3g54610 | GCN5 | 256.6 | 92.3 | 5502.3 | 3446.5 | 2020.6 |
| 11 | At1g32750 | TAF1B | At1g72390 | SPT20 | 258.8 | 5.5 | 1702.5 | 1398.6 | 17199.5 |
| 12 | At1g17440 | TAF12B | At2g13370 | CHR5 | 261.8 | 3768.4 | 129 | 1889.8 | 19.6 |
| 13 | At1g02680 | TAF13 | At1g32750 | TAF1B | 285.5 | 744.5 | 2116 | 2013.9 | 1885.3 |
| 14 | At1g72390 | SPT20 | At2g13370 | CHR5 | 296.7 | 959.4 | 206.5 | 140.8 | 3661.9 |
| 15 | At4g16420 | ADA2B | At4g29790 | ADA3 | 315.6 | 2734.4 | 966.2 | 976.3 | 84.4 |
| 16 | At1g02680 | TAF13 | At1g04950 | TAF6 | 330.5 | 346.1 | 1827.7 | 1061.4 | 523.2 |
| 17 | At1g02680 | TAF13 | At3g27100 | SUS1 | 334.8 | 2570.5 | 345.5 | 508.5 | 6808.6 |
| 18 | At1g32750 | TAF1B | At2g17930 | TRA1A | 339.7 | 912.1 | 889.7 | 2158.4 | 5755.3 |
| 19 | At2g17930 | TRA1A | At4g16420 | ADA2B | 358.8 | 124.2 | 4677.5 | 2905.3 | 1184.4 |
| 20 | At1g04950 | TAF6 | At4g31720 | TAF10 | 377.1 | 864.8 | 2178.7 | 634.8 | 32.6 |
| 21 | At1g02680 | TAF13 | At1g54140 | TAF9 | 430.9 | 142.8 | 1530.5 | 15622.6 | 3374 |
| 22 | At1g17440 | TAF12B | At1g72390 | SPT20 | 435.2 | 1511 | 1180.6 | 1791.3 | 1163.2 |
| 23 | At2g13370 | CHR5 | At4g29790 | ADA3 | 469.1 | 373.4 | 1177.1 | 2125 | 843.3 |
| 24 | At1g02680 | TAF13 | At4g31720 | TAF10 | 482 | 2554 | 228.8 | 427.2 | 1064.2 |
| 25 | At1g32750 | TAF1B | At2g13370 | CHR5 | 489.7 | 1185 | 3523.9 | 1579 | 2548.7 |
| 26 | At1g72390 | SPT20 | At2g17930 | TRA1A | 491.9 | 929.8 | 7664.1 | 2540.6 | 382.9 |
| 27 | At1g17440 | TAF12B | At2g14850 | ADA1A | 509.9 | 563.8 | 2349.7 | 328 | 12012.7 |
| 28 | At1g54140 | TAF9 | At4g31720 | TAF10 | 543.1 | 547.6 | 137.8 | 18320.2 | 280.8 |
| 29 | At1g32750 | TAF1B | At5g58575 | SGF11 | 573.2 | 1972.6 | 1479.7 | 1786.7 | 12185 |
| 30 | At3g10070 | TAF12 | At5g40550 | SGF29B | 576.3 | 1814.2 | 466.1 | 1005.4 | 19138.8 |
| 31 | At1g17440 | TAF12B | At4g29790 | ADA3 | 601.2 | 1368.2 | 1636.9 | 2773 | 572.6 |
| 32 | At1g54360 | TAF6B4 | At2g17930 | TRA1A | 613.1 | 2589.2 | 1343.7 | 1096.5 | 1074.8 |
| 33 | At1g72390 | SPT20 | At2g14850 | ADA1A | 659.8 | 224.1 | 2409.6 | 2249.2 | 4698.8 |
| 34 | At1g17440 | TAF12B | At2g17930 | TRA1A | 718.4 | 1106.6 | 5512.9 | 1279.2 | 117.6 |
| 35 | At1g02680 | TAF13 | At2g14850 | ADA1A | 777.9 | 446.8 | 5712.8 | 6936.2 | 11359.6 |
| 36 | At1g32750 | TAF1B | At2g14850 | ADA1A | 780.8 | 129.4 | 7427.5 | 1777.1 | 1345.7 |
| 37 | At1g17440 | TAF12B | At4g16420 | ADA2B | 785.6 | 1057.4 | 3349.8 | 2005.7 | 1624.9 |
| 38 | At3g27100 | SUS1 | At4g31720 | TAF10 | 793.1 | 3246.7 | 821 | 350.5 | 5879.1 |
| 39 | At2g14850 | ADA1A | At4g16420 | ADA2B | 872.4 | 652.8 | 965.4 | 326.1 | 12755.7 |
| 40 | At1g54360 | TAF6B4 | At3g54610 | GCN5 | 897 | 1218.2 | 422.4 | 1624.3 | 8621.1 |
| 41 | At1g32750 | TAF1B | At4g29790 | ADA3 | 897.7 | 186.4 | 9527.1 | 1397.2 | 12528 |
| 42 | At1g02680 | TAF13 | At1g72390 | SPT20 | 923.8 | 1201.9 | 4235.8 | 744.2 | 7934.4 |
a MR values represent here <1000 shows significant co-expression data (in bold) [43]