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. 2015 Aug 11;10(8):e0134059. doi: 10.1371/journal.pone.0134059

Table 2. ORs and 95% CIs of DNMT3b polymorphisms for gastric atrophy and gastric cancer.

Genotype Controls(%) n = 961 GC(%) n = 447 OR(95%CI) a P value GA(%) n = 111 OR(95%CI) a P value
rs6119954
    GG 45.1 44.8 Reference 52.3 Reference
    GA 46.3 44.6 1.00(0.76–1.31) 1.00 38.7 0.70(0.46–1.07) 0.10
    AA 8.6 10.6 1.37(0.88–2.13) 0.17 9.0 0.89(0.43–1.83) 0.75
rs1569686
    TT 83.4 80.5 Reference 82.9 Reference
    TG 15.6 18.3 1.14(0.82–1.60) 0.44 16.2 0.99(0.58–1.70) 0.97
    GG 1.0 1.1 1.33(0.41–4.31) 0.64 0.9 0.92(0.11–7.56) 0.94
rs4911107
    AA 83.2 80.5 Reference 82.9 Reference
    AG 15.7 18.3 0.86(0.26–2.88) 0.81 16.2 1.07(0.12–9.14) 0.95
    GG 1.1 1.1 0.76(0.23–2.46) 0.64 0.9 1.08(0.13–8.86) 0.94
rs4911259
    GG 83.1 80.3 Reference 82.9 Reference
    GT 15.8 18.6 0.86(0.26–2.89) 0.81 16.2 1.06(0.12–9.04) 0.96
    TT 1.1 1.1 0.76(0.23–2.45) 0.64 0.9 1.09(0.13–8.88) 0.94
rs8118663
    AA 32.7 28.2 Reference 34.2 Reference
    AG 49.2 52.1 1.28(0.95–1.72) 0.10 50.5 0.96(0.62–1.50) 0.96
    GG 18.1 19.7 1.32(0.91–1.91) 0.15 15.3 0.76(0.41–1.39) 0.37
Haplotype b
    GTA 56.5 54.0 Reference 59.4 Reference
    ATG 31.1 32.5 1.16(0.93–1.44) 0.18 28.4 0.88(0.63–1.21) 0.43
    GGG 8.8 10.4 1.25(0.90–1.72) 0.18 9.0 0.96(0.58–1.60) 0.88
    GTG 2.9 2.7 1.04(0.57–1.89) 0.90 3.2 1.00(0.42–2.37) 1.00

aORs for each genotype and haplotype were calculated adjusting for age, sex and H.pylori infection in logistic regression model.

bThe haplotype was lined with rs6119954, rs1569686 and rs8118663 and displayed as percentage.