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. 2015 Aug 12;10(8):e0135038. doi: 10.1371/journal.pone.0135038

Table 3. Identification of 27 differentially expressed genes involved in P. delavayi flower pigmentation.

Unigene ID Pl_FPKM Pd_FPKM log2(Pd/Pl) p-value FDR Predicted function
Up-regulated genes (15)
Unigene7271_All 1.0926 12.414 3.5061 1.41E-60 8.63E-59 CHS
Unigene45464_All 0 3.8864 11.9242 5.11E-07 3.18E-06 CHS
CL7622.Contig1_All 3.2381 10.0341 1.6317 3.16E-15 4.39E-14 CHI
CL2583.Contig1_All 201.7592 820.2684 2.0235 0 0 F3H
CL7561.Contig2_All 5.2308 11.3517 1.1178 4.92E-07 3.09E-06 FLS
CL1376.Contig3_All 0.2903 1.8999 2.7103 1.76E-08 1.34E-07 DFR
CL1376.Contig5_All 0.159 1.189 2.9027 5.71E-05 2.51E-04 DFR
CL1376.Contig6_All 3.0482 226.7622 6.2171 0 0 DFR
Unigene21659_All 1.8912 5.3039 1.4878 1.68E-09 1.43E-08 DFR
Unigene13390_All 62.6394 525.0521 3.0673 0 0 ANS
CL3395.Contig1_All 3.5064 8.4245 1.2646 6.32E-16 9.31E-15 3GT
CL3906.Contig2_All 0.8079 9.6622 3.5801 4.36E-72 3.15E-70 3GT
Unigene11227_All 17.9454 74.0118 2.0441 2.16E-242 5.32E-240 3GT
CL4890.Contig1_All 99.39 242.6426 1.2877 0 0 3GT
CL4890.Contig2_All 110.5854 253.0147 1.1941 0 0 3GT
Down-regulated genes (12)
CL1498.Contig1_All 9.522 0.696 -3.7741 2.57E-54 1.41E-52 CHS
Unigene18441_All 37.3852 9.5524 -1.9683 5.21E-107 5.57E-105 THC2'GT
CL7622.Contig3_All 39.2223 19.029 -1.0435 5.65E-42 2.33E-40 CHI
Unigene30832_All 11.5703 2.6567 -2.1227 3.52E-08 2.57E-07 CHI
Unigene30833_All 9.5425 1.9625 -2.2817 6.85E-08 4.82E-07 CHI
CL8830.Contig1_All 110.819 0.5231 -7.7269 0 0 FNS II
CL8830.Contig2_All 25.5164 5.8693 -2.1202 2.31E-91 2.13E-89 FNS II
Unigene8606_All 1129.5084 318.1654 -1.8278 0 0 FLS
CL9282.Contig1_All 1.6743 0.3238 -2.3704 3.00E-05 1.39E-04 DFR
Unigene1005_All 8.1856 1.6398 -2.3196 7.78E-09 6.14E-08 3GT
Unigene33533_All 3.1914 0.5424 -2.5568 1.59E-04 6.33E-04 3GT
CL11011.Contig1_All 42.2327 7.2877 -2.5348 1.51E-83 1.26E-81 5GT

Notes: Pl_FPKM, FPKM value in Pl; Pd_FPKM, FPKM value in Pd.