Skip to main content
. 2015 Aug 12;10(8):e0135640. doi: 10.1371/journal.pone.0135640

Table 2. Positively and negatively selected sites for human bocavirus strains originating from this study.

Method Positive Negative
SLAC None 29 sites
FEL 536, 546 34 sites
FUBAR 17, 40, 225, 361, 411, 421, 534, 535, 536, 546, 563 38 sites
IFEL 411, 546 17 sites
MEME 225, 361, 392, 396, 401, 409, 410, 411, 413, 421, 428, 546, 547, 556, 563 -

FEL: fixed-effects likelihood; FUBAR: fast unconstrained Bayesian approximation methods; IFEL: internal branch fixed-effects likelihood; MEME: mixed effects model of evolution; SLAC: single-likelihood ancestor.