Table 1. Programs that aid in the post-processing of results obtained from Structure-like methods.
Software | Platform | Input type/ format |
Description | Refs |
---|---|---|---|---|
Structure
Harvester |
Online & downloadable Python script |
Zipped Structure result files |
Determines a choice of K. Produces input files for Clumpp. |
(Earl and Vonholdt 2012) |
Clumpp | Unix, Linux, Dos, Mac |
Clumpp formata |
Deals with label switching within a single K value. Evaluates the similarity of replicate runs. |
(Jakobsson and Rosenberg 2007) |
Distruct | Unix, Linux, Dos, Mac |
Distruct formata,b |
Produces graphical display for a single replicate run. |
(Rosenberg 2004) |
Clumpak | Online & Unix, Linux, Mac |
Multiple formats, enabling direct input from Structure and other Structure- like programs |
Deals with label switching within a single K value. Deals with label switching across multiple K values. Clusters replicate runs into distinct modes. Produces graphical displays for each mode within each K. Determines a choice of K. |
This paper |
Input files can be obtained from the output of Structure-like programs.
One of the input files can be obtained from the output of Clumpp.