Table 1. Single nucleotide polymorphisms and summary statistics of PvMSP3α block II in different geographical regions.
Population | No. of isolates | SNPs | Singletons | Amino acid changes (Parsimony informative) | Haplotypes | θπ | Haplotype diversity | Tajima’s D | Fu & Li’s F |
---|---|---|---|---|---|---|---|---|---|
Sua Oi | 20 | 28 | 4 | 12 | 10 | 0.013 | 0.800 | 0.7558 | 0.797 |
Thailand# | 52 | 87 | 60 | 14 | 31 | 0.017 | 0.947 | -1.3265 | -3.835** |
India | 6 | 39 | 25 | 7 | 5 | 0.023 | 0.933 | -0.4033 | -0.4219 |
China | 6 | 27 | 6 | 9 | 5 | 0.019 | 0.933 | 0.7700 | 1.0298 |
Myanmar | 25 | 60 | 33 | 13 | 21 | 0.021 | 0.977 | -0.2238 | -1.5189 |
Sri Lanka | 17 | 36 | 9 | 15 | 11 | 0.017 | 0.926 | 0.4825 | 0.4395 |
South Korea | 33 | 36 | 14 | 10 | 13 | 0.016 | 0.816 | 1.1073 | -0.3151 |
Brazil | 12 | 29 | 8 | 9 | 10 | 0.015 | 0.955 | 0.4974 | 0.4652 |
Mexico | 15 | 38 | 5 | 17 | 6 | 0.020 | 0.819 | 0.9332 | 1.1185 |
Peru | 23 | 29 | 1 | 13 | 9 | 0.016 | 0.897 | 1.7677* | 1.8257** |
Colombia | 22 | 35 | 3 | 15 | 15 | 0.016 | 0.961 | 0.6206 | 1.1887 |
Venezuela | 26 | 24 | 0 | 10 | 7 | 0.015 | 0.818 | 2.4208** | 2.2213** |
World-wide | 237 | 158 | 108 | 29 | 100 | 0.019 | 0.972 | -1.5136* | -6.5208** |