Table 3.

piRNAs differential expression by small RNA deep sequencing: metastatic versus localized ccRCC.^a

piRNA ID	fRNAdb ID	L (Ave)	M (Ave)	Log2 ratio	P	FDR
piR-42144	FR271551|DQ581033	0.06	31.17	8.67	2.42E-05	0.0037
piR-44785	FR012473|DQ583674	0.03	2.07	6.02	0.0040	0.0908
piR-59056	R222326|DQ597945	0.38	18.56	5.74	0.0002	0.0112
piR-59101	FR230731|DQ597990	0.56	16.44	5.56	7.48E-05	0.0063
piR-60029	FR140858|DQ598918	0.03	1.59	5.37	0.0046	0.0941
piR-50403	FR374932|DQ589292	0.27	4.07	4.65	0.0030	0.0734
piR-32079	FR240375|DQ570968	10.71	146.73	4.47	6.32E-07	0.0006
piR-41965	FR259053|DQ580854	5.42	75.34	4.43	8.16E-06	0.0026
piR-57010	FR381169|DQ595899	0.45	7.25	3.91	0.0007	0.0303
piR-75530	FR051200|DQ614419	21.20	185.30	3.65	7.94E-06	0.0026
piR-34463	FR008504|DQ573352	6.40	56.98	3.55	1.49E-05	0.0035
piR-9540	FR183841|DQ548429	7.75	55.99	3.55	9.25E-05	0.0063
piR-37891	FR023255|DQ576780	7.03	54.95	3.53	0.0002	0.0112
piR-9541	FR145409|DQ548430	8.54	61.79	3.51	9.51E-05	0.0063
piR-2099	FR270793|DQ540988	16.27	120.73	3.37	2.84E-05	0.0037
piR-19514	FR197620|DQ558403	12.33	79.67	3.29	0.0001	0.0085
piR-58029	FR288759|DQ596918	46.28	306.41	3.22	2.48E-05	0.0037
piR-52354	FR114547|DQ591243	48.82	302.85	3.10	3.94E-05	0.0040
piR-52355	FR068012|DQ591244	49.93	304.61	3.07	4.47E-05	0.0041
piR-39894	FR329966|DQ578783	57.78	324.96	3.06	8.19E-05	0.0063
piR-54782	FR145575|DQ593671	11.47	59.38	2.92	0.0025	0.0647
piR-32444	FR341794|DQ571333	9.97	54.20	2.89	0.0004	0.0198
piR-57855	FR271147|DQ596744	9.24	47.23	2.79	0.0007	0.0302
piR-58593	FR035643|DQ597482	10.47	46.72	2.79	0.0048	0.0959
piR-1170	FR002163|DQ540059	4.95	23.19	2.73	0.0012	0.0477
piR-57916	FR111727|DQ596805	31.38	134.02	2.67	0.0025	0.0649
piR-56650	FR219510|DQ595539	12.65	51.67	2.67	0.0017	0.0553
piR-58508	FR205116|DQ597397	7.70	46.88	2.66	0.0007	0.0302
piR-1514	FR086322|DQ540403	1042.43	4095.00	2.65	0.0015	0.0509
piR-4018	FR007806|DQ542907	6.67	32.63	2.64	0.0028	0.0713
piR-43607	FR138938|DQ582496	134.43	525.55	2.63	0.0019	0.0569
piR-59374	FR276112|DQ598263	84.58	419.95	2.61	3.25E-05	0.0037
piR-1037	FR325161|DQ539926	5.71	24.35	2.60	0.0018	0.0567
piR-57649	FR252389|DQ596538	11.56	54.73	2.60	0.0010	0.0300
piR-75191	FR279346|DQ614080	73.35	351.67	2.56	0.0043	0.0908
piR-82944	FR370156|DQ621833	498.41	1865.53	2.53	0.0020	0.0569
piR-58507	FR331389|DQ597396	7.03	38.70	2.49	0.0014	0.0507
piR-32934	FR163506|DQ571823	17.83	67.05	2.47	0.0029	0.0732
piR-31923	FR134050|DQ570812	17.75	77.92	2.46	0.0014	0.0507
piR-32051	FR383421|DQ570940	171.04	589.06	2.42	0.0037	0.0859
piR-59127	FR092662|DQ598016	31.24	161.07	2.25	0.0035	0.0821
piR-72436	FR198023|DQ611325	1165.30	7394.72	2.18	0.0018	0.0558
piR-54043	FR283482|DQ592932	77.64	261.96	2.09	0.0043	0.0908
piR-2329	FR080741|DQ541218	1502.17	4441.62	1.75	0.0043	0.0908
piR-51518	FR022075|DQ590407	37.59	6.66	−2.20	0.0003	0.0143
piR-46515	FR270274|DQ585404	2.68	0.01	−6.13	0.002438	0.0649

Ave, normalized average piRNA counts.

^aBold piRNAs are discussed in detail in the text.