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. 2015 Oct;64(5):464–470. doi: 10.1016/j.parint.2015.06.010

Table 1.

Primer pairs employed to amplify chicken cytoplasmic beta-actin (actb), beta-2 microglobulin (β2m), glyceraldehyde 3-phosphate dehydrogenase (gapdh) and tata-binding protein (tbp) gene fragments, which were evaluated here as reference sequences for qPCR normalisation.

Target gene Primer identity Sequence (5′ to 3′) Theoretical annealing temperature (°C) Amplicon size (bp) Primer references GenBank accession nos. for locus Primer location (from 5′ end) Gene references
actb Forward — actbF GAGAAATTGTGCGTGACATCA 60 152 [58] X00182 3003–3023 [41]
Reverse — actbR CCTGAACCTCTCATTGCCA 60 3136–3154
β2m Forward — b2mF GCAAACCTCTGTCTTTCGGC 60 126 this study Z48922 3191–3210 [42]
Reverse — b2mR ATGTTCAGACCAGAGCCTGC 60 3297–3316
gapdh Forward — GAPDH_For1 CGCAAGGGCTAGGACGG 60 98 [59] M11213 220–236 [43]
Reverse — GAPDH_Rev1 GCGCTCTTGCGGGTACC 60 301–317
tbp Forward — tbpF TAGCCCGATGATGCCGTAT 62 147 [58] NM_205103 144–162 [44]
Reverse — tbpR GTTCCCTGTGTCGCTTGC 60 273–290