Skip to main content
. 2015 Apr 14;4:143–145. doi: 10.1016/j.gdata.2015.04.006

Table 1.

RNA quality assessment of samples studied in this work.

Experiment Arabidopsis Sample A260/A280(a) RIN(b) 28S/18S(b)
Repeat-1 Col 1 1.97 7.1 1.3
sdg25 2 2.04 7.0 1.3
sdg26 3 2.06 7.0 1.3
sdg25 sdg26 4 1.95 7.2 1.6
atx1 5 2.06 7.0 1.3
sdg26 atx1 6 2.03 7.0 1.4
clf 7 1.86 7.1 1.3
sdg26 clf 8 2.05 7.0 1.6
ldl1 ldl2 9 1.92 7.4 1.7
sdg25 ldl1 ldl2 10 2.04 7.0 1.3
sdg26 ldl1 ldl2 11 1.91 7.2 1.4
Repeat-2 Col 12 1.92 7.4 1.5
sdg25 13 1.88 7.0 1.3
sdg26 14 2.02 7.0 1.5
sdg25 sdg26 15 1.95 7.0 1.4
atx1 16 2.01 7.0 1.3
sdg26 atx1 17 2.03 7.0 1.3
clf 18 1.85 7.0 1.3
sdg26 clf 19 2.02 7.0 1.4
ldl1 ldl2 20 1.91 7.4 1.6
sdg25 ldl1 ldl2 21 1.96 7.6 1.4
sdg26 ldl1 ldl2 22 2.02 7.3 1.4
Repeat-3 Col 23 1.98 7.2 1.9
sdg25 24 1.93 7.2 1.8
sdg26 25 1.94 7.0 1.6
sdg25 sdg26 26 2.01 7.0 1.4
atx1 27 1.95 7.3 1.5
sdg26 atx1 28 1.97 7.1 1.4
clf 29 1.95 7.1 1.4
sdg26 clf 30 1.93 7.0 1.6
ldl1 ldl2 31 1.93 7.4 1.5
sdg25 ldl1 ldl2 32 1.95 7.1 1.7
sdg26 ldl1 ldl2 33 2.01 7.4 1.7

(a) A ratio of A260/A280 > 1.8 indicates little protein contamination.

(b) RNA integration number (RIN) ≥ 7.0 and 28S/18S ≥ 0.7 indicate good quality for microarray assay.