Fig 2.

Maximum likelihood (ML) tree of the 10 CRF17_BF sequences plus the 3 CRF17_BF references (A). The ML tree was inferred by using PhyML program. Transmission clusters were identified by a bootstrap support >90% (clusters defined by the grey box). The tree was rooted using a midpoint rooting. Bayesian phylogenetic tree of the 10 CRF17_BF sequences plus the 3 CRF17_BF references (B). The Bayesian phylogenetic tree was inferred by using MrBayes. Clades with a posterior probability of one were considered epidemiological clusters (defined by the grey box).