Table 1.
General features of the four P. chlororaphis strains.
| HT66 | GP72 | 30–84 | O6 | |
|---|---|---|---|---|
| Number of bases | 7,298,823 bp | 6,663,241 bp | 6,665,021 bp | 6,977,251 bp |
| G + C (%) | 62.60 | 62.89 | 62.9 | 62.8 |
| Protein-coding genes | 6455 | 6091 | 5869 | 6236 |
| No. of protein-coding genes with function prediction | 5423 | 5062 | 5023 | 5278 |
| No. of protein-coding genes without function prediction | 1032 | 1029 | 846 | 949 |
| No. of protein-coding genes connected to KEGG Orthology | 3299 | 3152 | 3118 | 3169 |
| No. of protein-coding genes with COGs | 4679 | 4454 | 4297 | 4489 |
| No. of protein-coding genes coding signal peptides | 719 | 662 | 652 | 664 |
| No. of protein-coding genes coding transmembrane proteins | 1509 | 1444 | 1400 | 1453 |
| Coding percentage | 88.33% | 87.96% | 88.12% | 88.00% |
| RNA genes | 147 | 88 | 156 | 142 |
| rRNA genes (5S rRNA, 16S rRNA, 23S rRNA) | 12 (6, 1, 5) | 7 (2, 1, 4) | 19 (7, 6, 6) | 10 (5, 1, 4) |
| tRNA genes | 57 | 61 | 69 | 60 |
| Other RNA genes | 78 | 20 | 68 | 72 |
Gene annotations and comparisons were obtained from the IMG database [51].