Table 2.

Reads count and numbers of peaks.

			Number of reads in millions
Sample names	Antibody	Cell lines	Raw	No duplicate	MAPQ ≥ 20	Peak number
Ctl1	CTCF	Wehi-CT	43.58	36.1	28.6	24467
Ctl2	CTCF	Wehi-CT	36.1	32.9	26.1	23873
KD1	CTCF	Wehi-TFII-I-KD	36.2	32.3	25	19076
KD2	CTCF	Wehi-TFII-I-KD	36.46	23.7	16.9	15309