Table 3. Characteristics of nucleotide sequence for three amplified genes and best fit models of heterogeneous nucleotide substitution for each gene calculated from jModel Test under AIC and BIC criteria.
Sequence analysis | Nucleotide substitution model test | |||||||
---|---|---|---|---|---|---|---|---|
Sequence length | Informative sites | Variable sites | Conservative sites | Fit model for ML | AIC | Fit model for BI | BIC | |
COI | 814 | 334 | 403 | 411 | JC | 27387.768 | JC | 27970.811 |
16S | 446 | 197 | 271 | 175 | GTR+G | 10228.203 | GTR+G+I | 107778.6242 |
28S | 638 | 110 | 206 | 432 | GTR+G+I | 5021.643 | GT+G | 5614.864 |