Table 2.
Comparison of the number of reads in ChIP-seq analysis with ChIP-qPCR data of Rpl13a gene loci.
| ChIP-seq analysis |
ChIP-qPCR analysis |
||||||
|---|---|---|---|---|---|---|---|
| Name | Location | Control (reads) | Butyrate (reads) | Ratio (ChIP-seq) | Log2 (ChIP-seq, ratio) | ChIP-qPCR | Log2 (ChIP-qPCR) |
| Promoter1 | chr7:52384815:52384948 | 303 | 154 | 1.97 | 0.98 | 1.274 | 0.349 |
| Promoter2 | chr7:52384837:52384911 | 213 | 123 | 1.73 | 0.79 | 0.886 | − 0.175 |
| Intragenic1 | chr7:52383806:52383897 | 436 | 215 | 2.03 | 1.02 | 0.794 | − 0.333 |
| Intragenic2 | chr7:52383702:52383823 | 585 | 348 | 1.68 | 0.75 | 0.777 | − 0.364 |
| Correction value | 1.686 | ||||||