Table 2. Top 10 KEGG pathways enriched in small and large abdominal aortic aneurysm.
Category | Pathway | KEGG | N | n | P value |
---|---|---|---|---|---|
Small AAA-upregulated genes | Cytokine-cytokine receptor interaction | hsa04060 | 267 | 15 | 1.15*10−14 |
Chemokine signaling pathway | hsa04062 | 190 | 11 | 4.50*10−11 | |
Hematopoietic cell lineage | hsa04640 | 88 | 7 | 3.68*10−08 | |
NOD-like receptor signaling pathway | hsa04621 | 62 | 6 | 1.18*10−07 | |
Cell adhesion molecules (CAMs) | hsa04514 | 134 | 7 | 4.15*10−07 | |
Jak-STAT signaling pathway | hsa04630 | 155 | 7 | 9.36*10−07 | |
Intestinal immune network for IgA production | hsa04672 | 50 | 4 | 4.07*10−05 | |
T cell receptor signaling pathway | hsa04660 | 108 | 5 | 4.07*10−05 | |
Cytosolic DNA-sensing pathway | hsa04623 | 56 | 4 | 5.46*10−05 | |
Pathways in cancer | hsa05200 | 330 | 7 | 8.39*10−05 | |
Small AAA-downregulated genes | Ribosome | hsa03010 | 88 | 27 | 2.50*10−26 |
Metabolic pathways | hsa01100 | 1104 | 69 | 2.30*10−22 | |
Oxidative phosphorylation | hsa00190 | 135 | 26 | 4.25*10−20 | |
Parkinson's disease | hsa05012 | 133 | 25 | 3.60*10−19 | |
Alzheimer's disease | hsa05010 | 169 | 27 | 6.00*10−19 | |
Huntington's disease | hsa05016 | 185 | 28 | 6.00*10−19 | |
Focal adhesion | hsa04510 | 201 | 23 | 5.48*10−13 | |
Cardiac muscle contraction | hsa04260 | 79 | 15 | 7.66*10−12 | |
Arrhythmogenic right ventricular cardiomyopathy | hsa05412 | 76 | 11 | 1.65*10−07 | |
Vascular smooth muscle contraction | hsa04270 | 115 | 13 | 1.65*10−07 | |
Large AAA-upregulated genes | Cytokine-cytokine receptor interaction | hsa04060 | 267 | 20 | 2.52*10−17 |
Chemokine signaling pathway | hsa04062 | 190 | 14 | 3.53*10−12 | |
Hematopoietic cell lineage | hsa04640 | 88 | 10 | 9.95*10−11 | |
Primary immunodeficiency | hsa05340 | 35 | 7 | 1.89*10−09 | |
Cell adhesion molecules (CAMs) | hsa04514 | 134 | 9 | 7.87*10−08 | |
Intestinal immune network for IgA production | hsa04672 | 50 | 6 | 6.70*10−07 | |
Cytosolic DNA-sensing pathway | hsa04623 | 56 | 6 | 1.15*10−06 | |
NOD-like receptor signaling pathway | hsa04621 | 62 | 6 | 1.86*10−06 | |
Jak-STAT signaling pathway | hsa04630 | 155 | 8 | 2.30*10−06 | |
T cell receptor signaling pathway | hsa04660 | 108 | 7 | 2.40*10−06 | |
Large AAA-downregulated genes | Metabolic pathways | hsa01100 | 1104 | 78 | 1.05*10−24 |
Huntington's disease | hsa05016 | 185 | 31 | 3.64*10−20 | |
Oxidative phosphorylation | hsa00190 | 135 | 27 | 8.60*10−20 | |
Alzheimer's disease | hsa05010 | 169 | 28 | 2.45*10−18 | |
Parkinson's disease | hsa05012 | 133 | 25 | 7.70*10−18 | |
Ribosome | hsa03010 | 88 | 18 | 1.32*10−13 | |
Cardiac muscle contraction | hsa04260 | 79 | 16 | 4.25*10−12 | |
Focal adhesion | hsa04510 | 201 | 23 | 8.41*10−12 | |
Vascular smooth muscle contraction | hsa04270 | 115 | 17 | 1.27*10−10 | |
Fatty acid metabolism | hsa00071 | 42 | 10 | 1.70*10−08 |
AAA, abdominal aortic aneurysm; N, number of reference genes in the pathway; n, number of genes differentially expressed in pathway in small or large AAA compared to patients without AAA (Controls); > 2-fold difference, P value < 0.05 calculated with non-parametric Mann-Whitney test and corrected by Benjamini and Hochberg method. P value indicates the corrected significance of enrichment calculated from the hypergeometric test by Benjamini and Hochberg method. Pathways were identified using WebGestalt and were linked to the KEGG (Kyoto Encyclopedia of Genes and Genomes) website http://www.genome.jp/kegg/.