Appendix A. Calculations to demonstrate that the major contributor of Coronin-1A in BCa patient urine is not from lysed WBCs but from the bladder tumor.
Albumin determination | |
Concentration of albumin in blood* | 40 μg/μl |
Concentration range of albumin in BCa patient urine samples& | 0.012-2.56 μg/μl |
Mean albumin concentration in BCa patient urine samples | 1.18 μg/μl |
Approximate volume of blood in urine# | (1/40)×1.18 = 0.0295 μl |
White Blood Cells (WBC) determination | |
No. of WBC/μl of blood* | ~5000 WBCs |
Hence, ~0.0295 μl of blood in urine contains | (5000×0.0295) =147.5 WBCs |
Coronin-1A calculation | |
Weight of a single cell* | 3.5×10−3μg |
Amount of protein/cell§,* | 0.0007 μg |
40 μg of lysed WBC from buffy coat would be derived from | (1/0.0007)×40 ≈ 57,000 WBCs¥ |
Coronin-1A blot intensity of 57,000 WBC lysate£ | 34,403 |
Hence, 147.5 WBCs if lysed in urine would produce intensity of | (34,403/57000)×147.5 = 89.025 |
Actual mean Coronin-1A intensity from BCa urine sample blot | 25,788.58¶ |
Fold-change in intensity for Coronin-1A | (25,788.58/89.025) = 289.68 |
Reported in the literature
Deduced from our experimental analysis; further calculations were done using the higher limit of the range.
Assumption: Albumin source is solely blood
Protein weight is 20% of cells weight
Rounded down for calculations. Actual calculation is 57,142.86 WBCs
Result obtained from western blotting experiments conducted in our lab
Averaged value.