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. 2015 Aug 14;10(8):e0134435. doi: 10.1371/journal.pone.0134435

Table 1. Age estimates and Bayes Factors from BEAST analyses of 864 non-repetitive, non-recombinant, non-homoplastic core SNPs from 73 eBG54 (Agona) genomes.

Clock: Relaxed Clock Strict Clock
Model: GMRF Constant Population Size Constant Population Size
Mean MRCA 95% Confidence Interval Mean MRCA 95% Confidence Interval Mean MRCA 95% Confidence Interval
2013:
HME -5860227 -5860225 -5860298
Basal node 1932 1918–1945 1799 1618–1928 1839 1765–1894
rootHeight 1932 1917–1944 1800 1620–1927 1838 1764–1893
2015:
HME -5860231 -5860229 -5860300
Path sampling -5860609 -5860636 -5860702
Stepping-stone -5860599 -5860606 -5860665
Basal node 1931 1915–1944 1803 1635–1919 1839 1767–1894
rootHeight 1931 1916–1944 1805 1636–1920 1839 1767–1894

Note: Highest Bayes factors are indicated by bold, italic fonts. Path sampling and Stepping-stone analyses were performed along a series of 100 steps along the path, with a chain of 1M samples per step.