Table 3. Schistosoma mansoni genetic diversity estimated from microsatellite markers.

Genetic diversity was estimated per village, per region and per year for samples typed at nine (DMS1–542 samples in total) or six (DMS2–758 samples in total) microsatellites markers (see Table 1 for details on data collection).

			DMS1					DMS2
Region	Village	Year	Nμsat	Hs	Ho	AR #	F IS	Nμsat	Hs	Ho	AR ##	F IS
Northwest Senegal			388	0.54	0.52	3.74	0.04**	517	0.38	0.36	2.90	0.05**
	Rhonne	2007	98	0.55	0.50	3.74	0.06**	121	0.38	0.35	2.90	0.07*
	Diadiam	2007	6	0.55	0.52	3.73	0.06	8	0.42	0.44	2.93	-0.05
	Richard Toll	1993	7	0.54	0.51	3.83	0.07	7	0.37	0.38	2.83	-0.03
		1994	12	0.55	0.56	3.71	0.03	22	0.38	0.42	2.94	-0.11*
		2007	11	0.57	0.60	3.74	0.06	14	0.42	0.42	2.96	-0.001
	Ndombo	1997	53	0.49	0.48	3.41	0.03	62	0.35	0.33	2.72	0.05
		2006	5	0.46	0.49	3.00	-0.06	7	0.33	0.33	2.17	-0.01
	Theuss	2006	7	0.52	0.44	3.63	0.16**	18	0.37	0.36	2.68	0.01
		2007	67	0.54	0.52	3.72	0.04*	68	0.39	0.38	2.94	0.03
	Nder	2007	89	0.54	0.53	3.71	0.01	152	0.38	0.36	2.85	0.06*
	Ndieumeul	2007	15	0.54	0.47	3.77	0.12*	17	0.37	0.33	2.94	0.11*
	Mbodjene	2007	18	0.54	0.60	3.43	-0.11*	21	0.39	0.44	2.72	-0.13*
Southeast Senegal	Assoni	2011	154	0.50	0.45	3.55	0.12**	168	0.35	0.32	2.85	0.09**
Southwest Mali	Kokry-Bozo	2007	/	/	/	/	/	73	0.45	0.42	3.31	0.06*

DMS1: microsatellite dataset 1. DMS2: microsatellite dataset 2. N_μsat: number of successfully genotyped parasites. Hs: unbiased expected heterozygosity. Ho: observed heterozygosity. AR: Allelic richness.

^#: minimum of 10 alleles used for rarefaction.

^##: minimum of 14 alleles used for rarification.

Statistical significant F _IS values are given with * for the nominal level of 0.05 and with ** for the nominal level of 0.001.