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. 2015 Jun 10;309(4):C228–C238. doi: 10.1152/ajpcell.00266.2014

Table 1.

PCR primers

Primer Sequence
Usage Transcript Forward Reverse Product Size, bp PCR Cycle Count
Semiquantitative PCR Tfam 5′-ATGGCGCTGTTC CGGGGAATGTGG-3′ 5′-TTAATTCTCAGA GATGTCTCCCGGG-3′ 735 34
S12 5′-GGAAGGCATAGC TGCTGG-3′ 5′-CCTCGATGACATC CTTGG-3′ 638 26
Real-time PCR
    mRNA Tfam 5′-CGCCTGTCAGCC TTATCTGTA-3′ 5′-TGCATCTGGGTGT TTAGCTTA-3′ 131 n/a
COX I 5′-GCCAGTATTAGCA GCAGGTAT-3′ 5′-TGTTGATAAAGGA TTGGGTCT-3′ 102 n/a
S12 5′-ATGGACGTCAAC ACTGCTCT-3′ 5′-ATCTCTGCGTGCT TGCAT-3′ 127 n/a
β-Actin 5′-CCCCATTGAACA CGGCAT-3′ 5′-GCCAACCGTGAA AAGATGACC-3′ 154 n/a
    DNA COX I 5′-GCCAGTATTAGCA GCAGGTAT-3′ 5′-TGTTGATAAAGGA TTGGGTCT-3′ 102 n/a
COX II 5′-CCCATTTCAACTT GGCTTACA-3′ 5′-AGGGAGCTGATG AGGAATACA-3′ 102 n/a
D-loop region 5′-TCTCGATGGTAAC GGGTCTA-3′ 5′-GCCTTGACGGCT ATGTTGA-3′ 106 n/a
β-Actin 5′- AGCCTTCCTTCCT GGGTAAGT-3′ 5′-GGATGCCACAGGA TTCCATA-3′ 124 n/a

Tfam, mitochondrial transcription factor A; S12, ribosomal protein 12 (Rps12); COX I, cytochrome c oxidase subunit I; COX II, cytochrome c oxidase subunit II; D-loop region, noncoding regulatory region of the mitochondrial genome; β-actin, cytoskeletal protein β-actin; bp, base pairs.