Table 1.
PCR primers
Primer Sequence |
|||||
---|---|---|---|---|---|
Usage | Transcript | Forward | Reverse | Product Size, bp | PCR Cycle Count |
Semiquantitative PCR | Tfam | 5′-ATGGCGCTGTTC CGGGGAATGTGG-3′ | 5′-TTAATTCTCAGA GATGTCTCCCGGG-3′ | 735 | 34 |
S12 | 5′-GGAAGGCATAGC TGCTGG-3′ | 5′-CCTCGATGACATC CTTGG-3′ | 638 | 26 | |
Real-time PCR | |||||
mRNA | Tfam | 5′-CGCCTGTCAGCC TTATCTGTA-3′ | 5′-TGCATCTGGGTGT TTAGCTTA-3′ | 131 | n/a |
COX I | 5′-GCCAGTATTAGCA GCAGGTAT-3′ | 5′-TGTTGATAAAGGA TTGGGTCT-3′ | 102 | n/a | |
S12 | 5′-ATGGACGTCAAC ACTGCTCT-3′ | 5′-ATCTCTGCGTGCT TGCAT-3′ | 127 | n/a | |
β-Actin | 5′-CCCCATTGAACA CGGCAT-3′ | 5′-GCCAACCGTGAA AAGATGACC-3′ | 154 | n/a | |
DNA | COX I | 5′-GCCAGTATTAGCA GCAGGTAT-3′ | 5′-TGTTGATAAAGGA TTGGGTCT-3′ | 102 | n/a |
COX II | 5′-CCCATTTCAACTT GGCTTACA-3′ | 5′-AGGGAGCTGATG AGGAATACA-3′ | 102 | n/a | |
D-loop region | 5′-TCTCGATGGTAAC GGGTCTA-3′ | 5′-GCCTTGACGGCT ATGTTGA-3′ | 106 | n/a | |
β-Actin | 5′- AGCCTTCCTTCCT GGGTAAGT-3′ | 5′-GGATGCCACAGGA TTCCATA-3′ | 124 | n/a |
Tfam, mitochondrial transcription factor A; S12, ribosomal protein 12 (Rps12); COX I, cytochrome c oxidase subunit I; COX II, cytochrome c oxidase subunit II; D-loop region, noncoding regulatory region of the mitochondrial genome; β-actin, cytoskeletal protein β-actin; bp, base pairs.