TABLE 1.
Stratification of isolates included in this study into phenotypic groups
| Group | No. of isolates | % per phenotype |
|---|---|---|
| All resistant isolates (with at least the pncA coding region sequenced) | 2,760 | 100 |
| Resistant isolates with PZase and its promoter sequenced | 2,565 | 93 |
| Resistant isolates only with mutations in PZase | 2,187 | 79 |
| Resistant isolates only with mutations in the promoter region of pncA | 78 | 3 |
| Resistant isolates with mutations in both the promoter and the open reading frame | 12 | 0.4 |
| Resistant isolates without a mutation in PZase | 483 | 18a |
| All susceptible isolates (with at least the pncA coding region sequenced) | 3,329 | 100 |
| Susceptible isolates with pncA and its promoter sequenced | 3,207 | 96 |
| Susceptible isolates only with mutations in PZase | 307 | 6 |
| Susceptible isolates only with mutations in the promoter region of pncA | 14 | 0.4 |
| Susceptible isolates with mutations in both the promoter and the open reading frame | 0 | 0 |
| Susceptible isolates without a mutation in PZase or the promoter region | 3,022 | 91 |
It is important to recognize that not all the isolates in this group are considered “unexplained resistance” cases. These percent values have been calculated with respect to all isolates with a pncA sequence of the same phenotype. Because not all isolates included an analysis of the promoter region, some of these isolates may harbor a mutation in the promoter region and therefore are not in the unexplained resistance group.