Table 3.
Information on individual data sets and setting used in the analyses
| Locus | Alignment length | Parsimony-informative sites | Variable sites | Model of evolutiona | Clock for *BEAST |
|---|---|---|---|---|---|
| TNAC1035 | 752 (753) | 123 (184) | 147 (250) | HKY+G (1) | RLC |
| TNAC1142 | 4408 (4603) | 238 (387) | 310 (524) | HKY+G (2) | RLC |
| XYL | 915 (1121) | 138 (307) | 199 (448) | HKY+G (1) | RLC |
| TNAC1364 | 1631 (1631) | 260 (409) | 293 (584) | HKY+G (2) | RLC |
| NUC | 844 (889) | 99 (176) | 128 (268) | K80+G | b |
| TNAC1403 | 2094 (2707) | 268 (367) | 327 (562) | HKY+G (3) | RLC |
| TNAC1463 | 4913 (5163) | 519 (993) | 838 (1333) | HKY+G (4) | RLC |
| BLZ1 | 1490 (1495) | 119 (211) | 249 (412) | HKY+G (1) | RLC |
| TNAC1610 | 1647 (1736) | 104 (236) | 183 (379) | HKY+G (3) | RLC |
| TOPO6 | 1092 (1101) | 129 (211) | 164 (303) | HKY+G (1) | RLC |
| TNAC1497 | 1256 (2134) | 142 (225) | 165 (325) | HKY+G (1) | RLC |
| TNAC1740 | 1487 (1509) | 207 (309) | 254 (465) | HKY+G (1) | RLC |
| matK | 2606 (2628) | 95 (100) | 203 (210) | HKY+G | RLC |
| Supermatrix | 25135 (24996) | 2852 (3633) | 4915 (5469) | c | b |
Notes: Values in brackets correspond to alignments including polyploids; RLC, random local clock.
aModels used for single locus analyses, in brackets models linked in the *Beast analysis.
bData set not included in the *Beast analysis.
cData set consisting of all loci and divided in five partitions.